Resources

Frictionless Data (FD) Tutorials and Documentation

• The software section on the main Frictionless website has links to more info about all the FD tools and software
• The Frictionless Framework Documentation has tutorials and documentation for using the Python code
• FD discussion forum for asking long questions
• FD Discord chat for asking short questions to the community
• FD Github repositories. Note: check out the README in each individual repository for documentation on how to use that software
  • Fellows website repository
  • frictionless-py repository
  • datapackage-r repository

Frictionless Data Workshops

Slides:

• Template slides for Fellows to use as a starting place (if you want)
• Frictionless Data intro slides
• FD for Reproducible Research slides - note: you don't need to do the tutorial in here
• FD in the lab slides

Note: these slides are all openly licensed, so they can be remixed/reused

Videos:

• Data package creator walk through video
• Goodtables command line walk through video
• Goodtables continuous validation walk through video
• Data Sharing and Management Snafu in 3 Short Acts video

Frictionless Data + Reproducible Research blogs and articles

• FAIR research
• Dryad validation collaboration
• Frictionless Data for Wheat
• Schema Collaboration
• Data Packages for Intermine
• eLife + FD case study
• Pacific Northwest National Laboratory case study
• Cell Migration Standardization Organization case study
• University of Cambridge retinal mosaics case study
• See more case studies here
• The Open Definition

Contributing Best Practices

• Open Knowledge Foundation coding standards
• Open Knowledge Foundation code of conduct

Data Management Best Practices

• Data Management Plans DMP Tools
• NIH data sharing guidelines
• Understanding JSON Schemas by json-schema.org
• Data Curation Centre: How to License Research Data
• Open Source Initiative's guide to licenses
• Open Life Science's video lesson about open licensing featuring Josh Simmons
• What is a data dictionary article by UCMerced Library
• BITSS Berkeley Initiative for Transparency in the Social Sciences Resources

Reproducible Research & Open Science Readings

• The Turing Way: a lightly opinionated guide to reproducible data science
• eLife Innovation Community Manager Emmy Tsang's talk on reproducible research
• eLife Labs Reproducible Document Stack blog
• Reproducible Computational Workflows with Continuous Analysis, Brett K. Beaulieu-Jones & Casey S. Greene. bioRxiv 056473
• The Center for Open Science
• Do you speak open science? Resources and tips to learn the language, Masuzzo and Martens, 2017
• Open Science MOOC
• Minda lab's open science best practices blog for a computational psychology lab
• The Royal Society Moving towards transparent and reproducible research
• ASAPbio preprint info centre
• OHBM Open Science - Towards Global Inclusivity in Open Science Video
• Open Science Glossary by the Open Science Training Handbook
• Open science, communal culture, and women's participation in the movement to improve science by the Murphy Et al., 2020 in PNAS
• PLOS What is Open Peer Review?
• #bropenscience is broken science, Whitaker and Guest 2020
• The Global Open Science Hardware GOSH Manifesto
• 10 Things to Know About Reproducibility and Replicability
• Challenges in irreproducible research, Nature
• Is Reproducible Research Accurate? | John Ioannidis | Talks at Google
• Data Science - 5.1.2 - What is Reproducible Research About, BobTrenwith
• What does research reproducibility mean? (Goodman et al, 2016, Science Translational Medicine)
• Open Minds Podcast: Creative Commons presents conversations with people working to make the Internet and our global culture more open and collaborative.
• Open Science in Kenya: Where Are We? by Mwangi et al, 2021, Frontiers in Research Metrics and Analytics
• Reproducibility vs. Replicability: A Brief History of a Confused Terminology
• Open and Reproducible Research on Open Science Framework

Coding Resources

• Markdown tutorial & resources by Ted Laderas
• GitHub Hello World introductory tutorial
• Git-it, an interactive Git & GitHub learning app by Jessica Lord
• Git Purr - learn Git concepts with cats! By Tomomi Imura.
• Git tutorial by Jenny Bryan, focused on Git and R/Rstudio
• Command Line cheatsheet by April Speight, and April's intro to Python books https://www.vogueandcode.com/books.
• Common Python errors flow chart & article from Python For Biologists
• Vaidehi Joshi's BaseCS tutorials for beginner computer science concepts
• Coding resources for environmental scientists from Openscapes
• The A11y Project, an open resource resource for accessible design and web development
• The Etymology of Programming video by Brittany Storoz at JSConf EU 2018
• "Stop Telling Women They Have Imposter Syndrome" by Ruchika Tulshyan and Jodi-Ann Burey
• "Turn impostor syndrome into confidence: 15 tips for managers and individuals" by Julia Martins